Bio-Scales Pilot Project |
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We’re excited to announce that preliminary data for the Bio-Scales Pilot Project, led by Mitchel J. Doktycz at Oak Ridge National Laboratory, is available in the NMDC data portal. The Bio-Scales project will generate metagenomic and metabolomic data, along with host transcriptomic data, to unravel plant-microbiome interactions and examine how Populus host traits influence the plant microbiome, rhizosphere biogeochemical processes, and nutrient pools. Explore the Bio-Scales data in the NMDC data portal. | ||
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Bulk Download |
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Search and discover microbiome data of interest in the data portal, then head over to the bulk download feature (see screenshot) to further select your data by your workflow and/or data file type of interest. This feature enables streaming downloads of multiple files as a zipped file. Note: ORCID iD login is required for downloading. | ||
Map Pan & Zoom |
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The map visualization on the NMDC portal has been a long time staple, showing the geographical locations of samples. A new feature has been added in this release that enables you to interact with the map and zoom in to see samples at a finer resolution. Tip: Zoom in on any dot on the map and click “Search this Region” to automatically apply the location to the search filter. | ||
Beta-test EDGE |
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To make data analysis products more comparable, the NMDC has a series of standardized bioinformatic workflows for processing metagenomics data within a user-friendly platform. The NMDC is looking for beta-testers for our series of standardized bioinformatic workflows for processing metagenomics data. (Other ’omics workflows are being incorporated.) If you are interested in being a beta-tester, please contact us at nmdc-edge@lanl.gov. | ||
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